{"id":4132,"date":"2015-01-06T02:06:10","date_gmt":"2015-01-06T07:06:10","guid":{"rendered":"http:\/\/labrigger.com\/blog\/?p=4132"},"modified":"2015-01-05T13:10:36","modified_gmt":"2015-01-05T18:10:36","slug":"python-ephys-and-calcium-imaging-analysis-code","status":"publish","type":"post","link":"http:\/\/labrigger.com\/blog\/2015\/01\/06\/python-ephys-and-calcium-imaging-analysis-code\/","title":{"rendered":"Python ephys and calcium imaging analysis code"},"content":{"rendered":"<p align=\"center\"><img loading=\"lazy\" decoding=\"async\" src=\"http:\/\/labrigger.com\/blog\/wp-content\/uploads\/2015\/01\/baseline.png\" alt=\"baseline\" width=\"800\" height=\"590\" class=\"alignnone size-full wp-image-4133\" srcset=\"http:\/\/labrigger.com\/blog\/wp-content\/uploads\/2015\/01\/baseline.png 800w, http:\/\/labrigger.com\/blog\/wp-content\/uploads\/2015\/01\/baseline-300x221.png 300w\" sizes=\"auto, (max-width: 800px) 100vw, 800px\" \/><\/p>\n<p>Andrew Giessel wrote some analysis code in Python when he worked in the Datta lab. He has since moved on to another venture, but he open-sourced the code. There are import routines for data from ScanImage and Ephus, but the majority of the code is acquisition platform agnostic. It&#8217;s called <a href=\"http:\/\/github.com\/dattalab\/d_code\">d_code<\/a>.<\/p>\n","protected":false},"excerpt":{"rendered":"<p align=\"center\">\n<p>Andrew Giessel wrote some analysis code in Python when he worked in the Datta lab. He has since moved on to another venture, but he open-sourced the code. There are import routines for data from&#8230;<\/p>\n<div class=\"read-more\"><a href=\"http:\/\/labrigger.com\/blog\/2015\/01\/06\/python-ephys-and-calcium-imaging-analysis-code\/\">Read More<\/a><\/div><\/p>\n","protected":false},"author":1,"featured_media":4133,"comment_status":"open","ping_status":"open","sticky":false,"template":"","format":"standard","meta":{"footnotes":""},"categories":[7],"tags":[25,38,30,28,44],"class_list":["post-4132","post","type-post","status-publish","format-standard","has-post-thumbnail","hentry","category-software","tag-analysis","tag-calcium-imaging","tag-computing","tag-electrophysiology","tag-python"],"_links":{"self":[{"href":"http:\/\/labrigger.com\/blog\/wp-json\/wp\/v2\/posts\/4132","targetHints":{"allow":["GET"]}}],"collection":[{"href":"http:\/\/labrigger.com\/blog\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"http:\/\/labrigger.com\/blog\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"http:\/\/labrigger.com\/blog\/wp-json\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"http:\/\/labrigger.com\/blog\/wp-json\/wp\/v2\/comments?post=4132"}],"version-history":[{"count":1,"href":"http:\/\/labrigger.com\/blog\/wp-json\/wp\/v2\/posts\/4132\/revisions"}],"predecessor-version":[{"id":4134,"href":"http:\/\/labrigger.com\/blog\/wp-json\/wp\/v2\/posts\/4132\/revisions\/4134"}],"wp:featuredmedia":[{"embeddable":true,"href":"http:\/\/labrigger.com\/blog\/wp-json\/wp\/v2\/media\/4133"}],"wp:attachment":[{"href":"http:\/\/labrigger.com\/blog\/wp-json\/wp\/v2\/media?parent=4132"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"http:\/\/labrigger.com\/blog\/wp-json\/wp\/v2\/categories?post=4132"},{"taxonomy":"post_tag","embeddable":true,"href":"http:\/\/labrigger.com\/blog\/wp-json\/wp\/v2\/tags?post=4132"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}