Visual stimulation and intrinsic imaging code
Posted in Software
Ian Nauhaus, whom UT Austin recently nabbed, is sharing his code for intrinsic imaging and visual stimulation.
The visual stimulation code is based off of Psychophysics Toolbox, which is already in use by many neuroscience labs the world over. The implementation varies by lab, and Ian’s implementation is one that sees heavy use in the Callaway lab.
The intrinsic imaging code has its origins in Dario Ringach’s lab (Dario also coded the software for the Trachtenberg scope, recently highlighted on Labrigger).
This is great, I’ve been looking for a matlab tool since forever. I hope it will work with my camera and NI hardware…
…This is very nice, indeed. Even nicer is that Ian Nauhaus also shares the code for visual area segmentation based on their recent paper [1]:
https://sites.google.com/site/iannauhaus/home/visual-area-segmentation
[1] Garrett, M.E., Nauhaus, I., Marshel, J.H., and Callaway, E.M. (2014). Topography and Areal Organization of Mouse Visual Cortex. J. Neurosci. 34, 12587–12600.
There is also a python version of the segmentation code available:
https://github.com/zhuangjun1981/retinotopic_mapping
I cannot find the folder “ISI_processing” on the website. Could anyone help about it? Thanks!