Using NI DAQmx in MATLAB
This post is from Rob Campbell:
As part of TENSS we have created a set of examples showing how to use DAQmx in MATLAB without the Data Acquisition Toolbox. This is achieved…
Tag: data acquisition
Tibbo Project System – modular microcontroller
Posted in Hardware
Tibbo makes modular microcontrollers, with plug-in modules for I/O ports (e.g. DB9), relays, sensors, digitizers, etc. They have different sizes, the largest of which is available as a Linux version.
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Open Ephys’ Cyclops LED driver
Posted in Hardware
We covered Open Ephys back in 2013. They have well-developed devices for extracellular electrophysiology, and have some work on intracellular electrophysiology as well. Check out the Cyclops LED driver too. It continues to be…
Constrained non-negative matrix factorization for calcium imaging data analysis
Posted in Papers
I tweeted about this last fall. This is the best algorithm I’ve seen for segmenting and extracting time course from calcium imaging data. Eftychios Pnevmatikakis developed the code in Liam Paninski’s lab. The work…
CANDLE-J for denoising 2p data
Posted in Software
Collaborative Approach for eNhanced Denoising under Low-light Excitation, or CANDLE, is a denoising algorithm specialized for the type of images that are acquired in 2-photon imaging applications. There’s code for both ImageJ and MATLAB available at…
PackIO for NI devices
Posted in Software
Adam Packer wrote some LabVIEW software for acquiring and generating data from National Instruments cards called PackIO. It is meant to trigger and synchronize equipment as well as record any data, with a few specific…