Short sentences (prose, not prison)
Posted in Tips
Monthly archives: February, 2014
PLoS One requires full data release with publication
Posted in Uncategorized
authors must make all data publicly available, without restriction, immediately upon publication of the article
Examples could include spreadsheets of original measurements (of cells, of fluorescent intensity, of respiratory volume), large datasets such as next-generation sequence reads,…
ACQ4: A Python-based open source system for neurophysiology
Posted in Software
Luke Campagnola, Megan Kratz, and Paul Manis recently published their in-house software for neurophysiology experiments. It’s an extensive set of tools, including multiphoton imaging, photostimulation mapping, image mosaic construction, electrophysiology, and more.
Website: acq4.org
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More resources
Posted in Tips
André Maia Chagas recently pointed us towards his blog, Open Neuroscience. It turned us on to Sparkfun’s educational section. It’s very extensive and well curated.
By the way, Sparkfun also has education discount that…
Box plots vs. bar charts
Posted in Software
Nature Methods has a special on box plots, and in particular, the web app BoxPlotR.
Box plots are great. However, the conventions for box plots are not completely uniform (see below), and that can…