The preprint for the wide field of view 2-photon system we built has been updated. Check it out at bioRxiv.org.
Preprint servers are a great way to share work-in-progress. ArXiv and bioRxiv…
Michael Graupner has coded a nice program for browsing and managing hdf5 files (closely related to MATLAB files) called hdf5Manager. And it’s open source.
…
This from Matt Palmatier:
Drug self-administration labs need swivels and there are plenty of medical devices (rotating luer fittings) that perform this function for pretty cheap. However, suppliers-that-shall-remain-nameless charge quite a bit for simple luer…
Labrigger has been experimenting with Raspberry Pis. We still find a lot of uses for Arduinos for little jobs around experimental rigs. Their simplicity and predictable performance (no background processes) make them easy to implement…
If your gmail account gets filled up and you need more space, you could pay for an upgraded gmail account with more storage. Or you can clear out space. For clearing out space, there are…
Following up SIMA, which has been covered here before:
The SIMA team has released a new version of its toolbox that includes a spike inference algorithm developed by Eftychios Pnevmatikakis and Liam Paninski’s…
From Benjamin Judkewitz:
I needed an IR viewer to see a Ti:S beam and was really surprised to find that most viewers still sell for > 1000 € (or $). Visualizing NIR used to be…
In the talk I gave at the Short Course at SfN 2014, I briefly discussed the process of optical system design. A common strategy is to start with a published design, or at…
Carson Chow recently shared his post-MATLAB suite of programming tools, and it involves RStudio, which is open-source. “I had planned to replace Matlab with Python, Julia, and R but I have…
Embrio isn’t completely open. They want to sell $50 licenses. Let’s get that out of the way first. However, it is an interesting alternative for programming Arduino hardware. It’s a visual programming environment, like…
Excerpt from “How the Laser Happened: Adventures of a Scientist”:
We were still working under a Joint Service contract, managed by the U.S. Army Signal Corps. One day, after we had been at it…
The Optical Imaging and Electrophysiological Recording in Neuroscience course is Jun 9-19 in Paris. Application deadline is March 30. Lots of great people will be teaching, including Valentina Emiliani, Isabel Llano, Brad…
Jeremy Freeman and his lab are developing tools for analyzing data using a workflow that is fundamentally more scalable not only in terms of computing power and data set size, but also in collaboration and sharing. The one-person, one-machine approach to data analysis can be highly…
SLAB is hiring. See details at the link above (“Now Hiring!!“) or here: http://labrigger.com/blog/now-hiring/
…
Experiment rooms can get noisy, so Labrigger puts the noisy bits in sound dampening cabinets like these. A separate room could be ideal, but this works too. Just put all the noisy equipment (rackmount portions…
