GNOOM for spherical treadmill VR

Mice can learn to navigate virtual reality environments using a spherical treadmill, and this behavior drives place cell and grid cell activity.

Christoph Schmidt-Hieber has started uploading his code to Google. …



Superhydrophobic spray-on coating now available

Neverwet is now available for about $20.

This is a spray-on, 2-part superhydrophobic coating (translucent when dry). What would it be useful for in a lab? For starters, spraying it on anything that needs to be cleaned regularly might make it easier to clean. Also, it can…



Local cross corr images

One key step in analyzing data form calcium imaging experiments is segmentation (i.e., drawing regions of interest, ROIs). There have…



MATLAB 2013a natively supports Kinect

There have been wrappers for interfacing with the Kinect device before, but the latest update to MATLAB makes it native to the Image Processing Toolbox. source

Drop a Kinect…



Trimming pipette tips

I saw Benjamin Judkewitz trim the fat end off of a pipette tip and stick it onto a 1 mL syringe to make a fine tip for the syringe (above). This is handy for…



A clinic in figure design

You don’t have to be an APBRmetrician to appreciate the graphics Kirk Goldsberry puts together from his analysis. They’re clear, the data-to-ink ratio is high, and there are appropriate…



The San Francisco Declaration on Research Assessment (DORA)

“The Journal Impact Factor, as calculated by Thomson Reuters, was originally created as a tool to help librarians identify journals to purchase, not as a measure of the scientific quality of research in an…



PubPeer catches image reuse in Cell paper



Cheap DIY Kwik-Cast

I find WPI’s Kwik-Cast handy for some things around the lab. When we were modest users, the price didn’t bother me too much. However, when we started going through so much of it, I…



Beaker genie

source: C&H



HG2 for Better Graphics in MATLAB

Undocumented MATLAB has an in depth look at the next generation graphics handler for MATLAB which you can use today, although it’s not officially released yet. Use the command line option “-hgVersion 2”…



hashtag NIHSequesterImpact



Feedly, to replace Google Reader

Here’s a follow up on the previous post about alternatives to Google Reader (which is being shut down).

Patrick Mineault commented that Feedly is looking good. I agree. Basic functionality is smooth and…



Scattering in tissue

Post by Jeffrey Stirman

The opacity of the brain is one barrier to optically imaging individual neurons and their connections. Scattering in tissue is the main reason tissue is not transparent; absorption also plays a…



Size comparison

Previously…
Sense of scale
R&D budgets in perspective