Commoditizing population calcium imaging analysis
More open source software to check out.
Two-Photon Processor and SeNeCA – A freely available software package to…
More open source software to check out.
Two-Photon Processor and SeNeCA – A freely available software package to…
Post by Christian Wilms
I’ll admit it: I’m lazy. When I use a calcium indicator and need to know its physico-chemical properties, I like to simply look it up in the manufacturer’s catalogue or…
Apparently kittens can see an optimized Farser-Wilcox optical illusion.
Fraser and Wilcox 1979 (pdf)
Rotating Snakes (pdf)
…
INCF’s brain atlases (mouse, macaque, and human) are easy to browse online. The system has been around for several years now, and keeps getting better.
Of course, the Allen Institute also maintains some excellent…
Randall Munroe did an xkcd cartoon a while back where he tried to explain a Saturn V rocket using only the 1000 most common words in English. The resulting work, entitled “Up Goer…
My MD friends tell me there’s no effective cough medication on the market. There are OTC and prescription medicines, but none of them have been proven to really work. That doesn’t mean that they won’t give you some level of subjective relief, but they’re not like asprin or pseudoephedrine (e.g., regular Sudafed)*.
We used to…
One of the factors that limits the depth at which one can image brain tissue in vivo with two-photon imaging is out-of-plane fluorescence. Although the excitation falls off as the square of the distance from…
Previously on Labrigger: Street fighting mathematics
And on that topic, and this is something the runners among us might appreciate, the Fibonacci sequence can be used to easily convert miles to kms.
Take two consecutive…
No. I don’t think so.
Anyways, CaliCode is a resource for population calcium imaging. It covers topics from inferring action potential trains from imaging data (hat tip to JV), to image processing and topical…
I’ve seen this line in a methods section before:
“Experiments were carried out at room temperature (19-29 degrees C).”
Which means: “Our lab is in a building with no A/C and poor heating.”
For…
Wolfgang Becker just gave a nice talk at the Berkeley Advanced Imaging Methods meeting.
I should add the Becker-Hinkl literature to the list of online references.
Previously
Catalogs as textbooks
Troubleshooting fluorescence microscopy
…
You can now post comments on PubPeer completely anonymously. Not even a login is required.
PubPeer has always allowed anonymous comments, but it used to be that you had to log in, so the…
Henry Markram got his wish. He was just awarded 500,000,000 Euros to build a computer model of the brain. In NIH terms, that’s over…
Unenthusiastic about spending thousands of dollars on electrophysiology software like pCLAMP? Try the free and open source Strathclyde Electrophysiology Software. It’s a suite of programs for recording and analyzing signals from intracellular electrophysiology…
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